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  5. LOC_Os03g60580.1

LOC_Os03g60580.1


Description : actin-depolymerizing factor


Gene families : OG0000480 (Archaeplastida) Phylogenetic Tree(s): OG0000480_tree ,
OG_05_0020917 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020084 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g60580.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00214610 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.05 Archaeplastida
AT1G01750 ADF11 actin depolymerizing factor 11 0.04 Archaeplastida
AT2G16700 ADF5, ATADF5 actin depolymerizing factor 5 0.05 Archaeplastida
AT2G31200 ADF6, ATADF6 actin depolymerizing factor 6 0.03 Archaeplastida
AT3G45990 No alias Cofilin/tropomyosin-type actin-binding protein family 0.03 Archaeplastida
AT4G34970 ADF9 actin depolymerizing factor 9 0.03 Archaeplastida
GSVIVT01026879001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
Gb_02796 No alias actin-depolymerizing factor 0.02 Archaeplastida
LOC_Os12g43340.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Mp3g20570.1 No alias actin-depolymerizing factor 0.02 Archaeplastida
Smo146459 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Solyc01g094400.3.1 No alias actin-depolymerizing factor 0.02 Archaeplastida
Solyc09g010440.3.1 No alias actin-depolymerizing factor 0.04 Archaeplastida
Zm00001e006185_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e038599_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002108 ADF-H 14 147
No external refs found!