LOC_Os03g63074.1


Description : lysine decarboxylase


Gene families : OG0002015 (Archaeplastida) Phylogenetic Tree(s): OG0002015_tree ,
OG_05_0006188 (LandPlants) Phylogenetic Tree(s): OG_05_0006188_tree ,
OG_06_0001600 (SeedPlants) Phylogenetic Tree(s): OG_06_0001600_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63074.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Gb_29486 No alias Purple acid phosphatase 15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_101065g0010 No alias Purple acid phosphatase 23 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_618219g0010 No alias Purple acid phosphatase 15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp1g23830.1 No alias Purple acid phosphatase 15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo177278 No alias Purple acid phosphatase 15 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0003993 acid phosphatase activity IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008286 Prn/Lys/Arg_de-COase_C 1033 1078
IPR004843 Calcineurin-like_PHP_ApaH 188 401
IPR000310 Orn/Lys/Arg_deCO2ase_major_dom 617 911
IPR015914 Purple_acid_Pase_N 63 176
IPR025733 Purple_acid_PPase_C_dom 473 517
No external refs found!