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  5. LOC_Os03g63650.1

LOC_Os03g63650.1


Description : Protein Brevis radix-like 4 OS=Oryza sativa subsp. japonica (sp|q84t65|brxl4_orysj : 407.0)


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0020064 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63650.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00206190 evm_27.TU.AmTr_v1... Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00048p00209000 evm_27.TU.AmTr_v1... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01016782001 No alias Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01022683001 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_18519 No alias Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os04g39940.1 No alias Putative protein Brevis radix-like 5 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os04g51172.1 No alias Putative protein Brevis radix-like 3 OS=Oryza sativa... 0.06 Archaeplastida
MA_129791g0010 No alias Protein Brevis radix-like 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_33275g0010 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_651632g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9366818g0010 No alias Protein Brevis radix-like 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c14_11230V3.1 No alias DZC (Disease resistance/zinc finger/chromosome... 0.04 Archaeplastida
Pp3c17_8500V3.1 No alias BREVIS RADIX-like 1 0.03 Archaeplastida
Solyc07g041230.3.1 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g096110.3.1 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006397_P001 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.19 Archaeplastida
Zm00001e007054_P001 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.17 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.2 Archaeplastida
Zm00001e041570_P002 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 273 327
IPR013591 Brevis_radix_dom 85 140
No external refs found!