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  5. AMTR_s00004p00154100

AMTR_s00004p00154100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.161

Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase


Gene families : OG0005635 (Archaeplastida) Phylogenetic Tree(s): OG0005635_tree ,
OG_05_0006499 (LandPlants) Phylogenetic Tree(s): OG_05_0006499_tree ,
OG_06_0007308 (SeedPlants) Phylogenetic Tree(s): OG_06_0007308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00154100
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001095.9 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_10436461g0010 No alias carotenoid isomerase (CrtISO) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!