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  5. AMTR_s00004p00159330

AMTR_s00004p00159330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.170

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0003199 (Archaeplastida) Phylogenetic Tree(s): OG0003199_tree ,
OG_05_0002654 (LandPlants) Phylogenetic Tree(s): OG_05_0002654_tree ,
OG_06_0002436 (SeedPlants) Phylogenetic Tree(s): OG_06_0002436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00159330
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT2G35860 FLA16 FASCICLIN-like arabinogalactan protein 16 precursor 0.03 Archaeplastida
AT3G11700 FLA18 FASCICLIN-like arabinogalactan protein 18 precursor 0.03 Archaeplastida
AT3G52370 FLA15 FASCICLIN-like arabinogalactan protein 15 precursor 0.04 Archaeplastida
AT5G06390 FLA17 FASCICLIN-like arabinogalactan protein 17 precursor 0.04 Archaeplastida
GSVIVT01022545001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
LOC_Os03g57460.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g06680.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_43595g0010 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Pp3c16_8540V3.1 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.02 Archaeplastida
Smo54466 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Zm00001e005932_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 300 420
IPR000782 FAS1_domain 63 192
No external refs found!