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  5. AT1G29800

AT1G29800


Description : RING/FYVE/PHD-type zinc finger family protein


Gene families : OG0001741 (Archaeplastida) Phylogenetic Tree(s): OG0001741_tree ,
OG_05_0007336 (LandPlants) Phylogenetic Tree(s): OG_05_0007336_tree ,
OG_06_0004415 (SeedPlants) Phylogenetic Tree(s): OG_06_0004415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29800
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 Archaeplastida
GSVIVT01014153001 No alias No description available 0.03 Archaeplastida
GSVIVT01015009001 No alias No description available 0.03 Archaeplastida
Gb_00553 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_38623 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g35910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g071980.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g017500.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e024905_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007165 signal transduction ISS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
MF GO:0035091 phosphatidylinositol binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000064 L-ornithine transmembrane transporter activity IEP Neighborhood
CC GO:0000781 chromosome, telomeric region IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003691 double-stranded telomeric DNA binding IEP Neighborhood
MF GO:0003837 beta-ureidopropionase activity IEP Neighborhood
MF GO:0003919 FMN adenylyltransferase activity IEP Neighborhood
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004707 MAP kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005290 L-histidine transmembrane transporter activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
MF GO:0005476 carnitine:acyl carnitine antiporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006208 pyrimidine nucleobase catabolic process IEP Neighborhood
BP GO:0006212 uracil catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006560 proline metabolic process IEP Neighborhood
BP GO:0006561 proline biosynthetic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009608 response to symbiont IEP Neighborhood
BP GO:0009610 response to symbiotic fungus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009649 entrainment of circadian clock IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009882 blue light photoreceptor activity IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010260 animal organ senescence IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015173 aromatic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015181 arginine transmembrane transporter activity IEP Neighborhood
MF GO:0015189 L-lysine transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019860 uracil metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
MF GO:0034256 chlorophyll(ide) b reductase activity IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0043153 entrainment of circadian clock by photoperiod IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046113 nucleobase catabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0090448 glucosinolate:proton symporter activity IEP Neighborhood
BP GO:0090449 phloem glucosinolate loading IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1900055 regulation of leaf senescence IEP Neighborhood
BP GO:1900057 positive regulation of leaf senescence IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901349 glucosinolate transport IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
MF GO:1901474 azole transmembrane transporter activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1901701 cellular response to oxygen-containing compound IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
BP GO:1905623 positive regulation of leaf development IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 181 246
IPR007461 Ysc84_actin-binding 364 488
No external refs found!