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  5. LOC_Os04g22380.1

LOC_Os04g22380.1


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum (sp|q6rvv4|tic32_pea : 302.0)


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0000631 (LandPlants) Phylogenetic Tree(s): OG_05_0000631_tree ,
OG_06_0001357 (SeedPlants) Phylogenetic Tree(s): OG_06_0001357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g22380.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT4G11410 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000204.28 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
GSVIVT01007686001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 Archaeplastida
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_24622g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.06 Archaeplastida
Pp3c22_1930V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Solyc09g010510.4.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
Zm00001e036623_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 32 181
No external refs found!