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  5. LOC_Os04g27980.1

LOC_Os04g27980.1


Description : Acidic endochitinase OS=Arabidopsis thaliana (sp|p19172|chia_arath : 252.0)


Gene families : OG0001290 (Archaeplastida) Phylogenetic Tree(s): OG0001290_tree ,
OG_05_0031041 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0029217 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g27980.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00104690 evm_27.TU.AmTr_v1... Acidic endochitinase OS=Nicotiana tabacum 0.04 Archaeplastida
AMTR_s00095p00105100 evm_27.TU.AmTr_v1... Acidic endochitinase OS=Nicotiana tabacum 0.03 Archaeplastida
AMTR_s00095p00172710 evm_27.TU.AmTr_v1... Acidic endochitinase OS=Nicotiana tabacum 0.04 Archaeplastida
AMTR_s00111p00033060 evm_27.TU.AmTr_v1... Hevamine-A OS=Hevea brasiliensis 0.04 Archaeplastida
GSVIVT01027016001 No alias Acidic endochitinase OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01027026001 No alias Acidic endochitinase OS=Nicotiana tabacum 0.03 Archaeplastida
Gb_01614 No alias Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 379.0) 0.03 Archaeplastida
LOC_Os01g64110.1 No alias Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 333.0) 0.04 Archaeplastida
Mp2g08740.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.04 Archaeplastida
Smo92194 No alias Hevamine-A OS=Hevea brasiliensis 0.03 Archaeplastida
Zm00001e020261_P001 No alias Acidic endochitinase OS=Phaseolus angularis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 34 288
No external refs found!