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  5. LOC_Os04g31040.1

LOC_Os04g31040.1


Description : violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE)


Gene families : OG0005008 (Archaeplastida) Phylogenetic Tree(s): OG0005008_tree ,
OG_05_0007173 (LandPlants) Phylogenetic Tree(s): OG_05_0007173_tree ,
OG_06_0007823 (SeedPlants) Phylogenetic Tree(s): OG_06_0007823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g31040.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00058770 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
GSVIVT01026405001 No alias Secondary metabolism.terpenoids.terpenoid... 0.04 Archaeplastida
MA_10426812g0010 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 Archaeplastida
MA_6771199g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g15960.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 Archaeplastida
Pp3c3_13220V3.1 No alias non-photochemical quenching 1 0.03 Archaeplastida
Solyc04g050930.3.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.04 Archaeplastida
Zm00001e008403_P001 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
MF GO:0046422 violaxanthin de-epoxidase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
InterPro domains Description Start Stop
IPR010788 VDE 126 366
No external refs found!