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LOC_Os04g31270.1


Description : ribosome biogenesis factor (RsgA)


Gene families : OG0005065 (Archaeplastida) Phylogenetic Tree(s): OG0005065_tree ,
OG_05_0008552 (LandPlants) Phylogenetic Tree(s): OG_05_0008552_tree ,
OG_06_0008204 (SeedPlants) Phylogenetic Tree(s): OG_06_0008204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g31270.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Smo54463 No alias Small ribosomal subunit biogenesis GTPase RsgA 1,... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010914 RsgA_GTPase_dom 59 243
No external refs found!