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  5. LOC_Os04g32950.1

LOC_Os04g32950.1


Description : lectin chaperone (CNX)


Gene families : OG0002926 (Archaeplastida) Phylogenetic Tree(s): OG0002926_tree ,
OG_05_0003256 (LandPlants) Phylogenetic Tree(s): OG_05_0003256_tree ,
OG_06_0004424 (SeedPlants) Phylogenetic Tree(s): OG_06_0004424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g32950.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT5G07340 No alias Calreticulin family protein 0.36 Archaeplastida
AT5G61790 CNX1, ATCNX1 calnexin 1 0.16 Archaeplastida
GSVIVT01001120001 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
GSVIVT01005679001 No alias Calnexin homolog OS=Glycine max 0.4 Archaeplastida
GSVIVT01005680001 No alias Calnexin homolog OS=Helianthus tuberosus 0.24 Archaeplastida
Gb_10890 No alias lectin chaperone (CNX) 0.15 Archaeplastida
MA_10427968g0010 No alias lectin chaperone (CNX) 0.06 Archaeplastida
Mp4g06370.1 No alias lectin chaperone (CNX) 0.02 Archaeplastida
Pp3c13_14280V3.1 No alias calnexin 1 0.04 Archaeplastida
Solyc03g118040.3.1 No alias lectin chaperone (CNX) 0.09 Archaeplastida
Zm00001e008284_P001 No alias lectin chaperone (CNX) 0.21 Archaeplastida
Zm00001e040803_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001580 Calret/calnex 27 382
No external refs found!