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  5. AMTR_s00005p00110340

AMTR_s00005p00110340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.29

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00110340
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00059040 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00026p00231290 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00026p00231340 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00034p00047290 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00035p00192640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00038p00164880 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00083p00121990 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00083p00122040 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00113p00028110 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00121p00041020 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00121p00041090 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!