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  5. LOC_Os04g34970.1

LOC_Os04g34970.1


Description : no hits & (original description: none)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g34970.1
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00232450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00021p00185480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 Archaeplastida
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G22985 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT1G63030 ddf2 Integrase-type DNA-binding superfamily protein 0.11 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 Archaeplastida
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.01 Archaeplastida
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.05 Archaeplastida
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.08 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01013914001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013917001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028050001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01030515001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01037712001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
LOC_Os01g64790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g06330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g09650.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g32140.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g09170.1 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.01 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g36100.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os08g41030.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g45110.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os09g11460.1 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
LOC_Os09g13940.2 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.01 Archaeplastida
MA_164803g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g077840.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g093610.1.1 No alias transcription factor (ERF) 0.01 Archaeplastida
Solyc03g117130.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g050750.2.1 No alias transcription factor (DREB) 0.01 Archaeplastida
Solyc04g071770.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g078640.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc05g052050.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e000608_P002 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e007332_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e007351_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e013096_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016421_P001 No alias transcription factor (ERF) 0.07 Archaeplastida
Zm00001e017516_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019159_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e020274_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e023078_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e025999_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e026192_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e032483_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e036401_P001 No alias transcription factor (DREB) 0.01 Archaeplastida
Zm00001e041533_P001 No alias transcription factor (DREB) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 62 111
No external refs found!