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Description : transcription factor (Trihelix)
Gene families : OG0000562 (Archaeplastida) Phylogenetic Tree(s): OG0000562_tree ,
OG_05_0000321 (LandPlants) Phylogenetic Tree(s): OG_05_0000321_tree ,
OG_06_0000571 (SeedPlants) Phylogenetic Tree(s): OG_06_0000571_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g36790.1 | |
| Cluster | HCCA: Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_10430713g0010 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| MA_6829664g0010 | No alias | transcription factor (Trihelix) | 0.02 | Archaeplastida | |
| MA_8003390g0010 | No alias | transcription factor (Trihelix) | 0.02 | Archaeplastida | |
| Mp4g09730.1 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| Smo413913 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.02 | Archaeplastida | |
| Solyc07g055100.4.1 | No alias | transcription factor (Trihelix) | 0.02 | Archaeplastida | |
| Zm00001e007998_P001 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| Zm00001e028191_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e032412_P001 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | Neighborhood |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
| CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
| CC | GO:0005787 | signal peptidase complex | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| BP | GO:0030258 | lipid modification | IEP | Neighborhood |
| BP | GO:0030259 | lipid glycosylation | IEP | Neighborhood |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Neighborhood |
| CC | GO:0036452 | ESCRT complex | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044440 | endosomal part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| CC | GO:1905368 | peptidase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |