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  5. LOC_Os04g37500.1

LOC_Os04g37500.1


Description : glutamate decarboxylase


Gene families : OG0000738 (Archaeplastida) Phylogenetic Tree(s): OG0000738_tree ,
OG_05_0001028 (LandPlants) Phylogenetic Tree(s): OG_05_0001028_tree ,
OG_06_0001000 (SeedPlants) Phylogenetic Tree(s): OG_06_0001000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g37500.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142920 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.glutamate... 0.02 Archaeplastida
AMTR_s00024p00145270 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.glutamate... 0.02 Archaeplastida
AT1G65960 GAD2 glutamate decarboxylase 2 0.05 Archaeplastida
AT2G02010 GAD4 glutamate decarboxylase 4 0.04 Archaeplastida
GSVIVT01011564001 No alias Amino acid metabolism.biosynthesis.glutamate... 0.04 Archaeplastida
MA_10431705g0010 No alias Glutamate decarboxylase OS=Petunia hybrida... 0.02 Archaeplastida
MA_442130g0010 No alias glutamate decarboxylase 0.05 Archaeplastida
Zm00001e005503_P001 No alias glutamate decarboxylase 0.05 Archaeplastida
Zm00001e007980_P003 No alias glutamate decarboxylase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 41 383
No external refs found!