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  5. LOC_Os04g39190.1

LOC_Os04g39190.1


Description : component FtsHi of protein translocation ATPase motor complex


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0006625 (LandPlants) Phylogenetic Tree(s): OG_05_0006625_tree ,
OG_06_0006523 (SeedPlants) Phylogenetic Tree(s): OG_06_0006523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39190.1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00047160 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
AT3G02450 No alias cell division protein ftsH, putative 0.04 Archaeplastida
AT3G16290 EMB2083 AAA-type ATPase family protein 0.06 Archaeplastida
AT4G23940 No alias FtsH extracellular protease family 0.03 Archaeplastida
Cre07.g352350 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.01 Archaeplastida
GSVIVT01019239001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.06 Archaeplastida
Gb_20809 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_28961 No alias component FtsHi of protein translocation ATPase motor complex 0.02 Archaeplastida
Pp3c17_20370V3.1 No alias AAA-type ATPase family protein 0.05 Archaeplastida
Pp3c4_20860V3.1 No alias cell division protein ftsH, putative 0.02 Archaeplastida
Smo166773 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
Smo98591 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
Solyc03g046340.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.03 Archaeplastida
Solyc08g082530.4.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.05 Archaeplastida
Zm00001e007868_P001 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 326 454
IPR011546 Pept_M41_FtsH_extracell 130 238
No external refs found!