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  5. LOC_Os04g41640.1

LOC_Os04g41640.1


Description : Chitinase 4 OS=Oryza sativa subsp. japonica (sp|o04138|chi4_orysj : 83.6)


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0002685 (LandPlants) Phylogenetic Tree(s): OG_05_0002685_tree ,
OG_06_0066525 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g41640.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.04 Archaeplastida
AMTR_s00001p00243570 evm_27.TU.AmTr_v1... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.05 Archaeplastida
AMTR_s00001p00243680 evm_27.TU.AmTr_v1... Chitinase 3 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00001p00243780 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.02 Archaeplastida
AMTR_s00045p00134660 evm_27.TU.AmTr_v1... Chitinase 10 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00066p00199730 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G05850 HOT2, ELP,... Chitinase family protein 0.04 Archaeplastida
AT2G43570 CHI chitinase, putative 0.02 Archaeplastida
AT2G43590 No alias Chitinase family protein 0.04 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
Gb_03376 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_07465 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_10203 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g39330.1 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g41620.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os05g04690.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10313114g0010 No alias Endochitinase B OS=Nicotiana tabacum... 0.04 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_44734g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_853077g0010 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Mp2g24410.1 No alias Endochitinase CH25 OS=Brassica napus... 0.05 Archaeplastida
Mp2g24440.1 No alias Endochitinase CH25 OS=Brassica napus... 0.04 Archaeplastida
Mp4g01780.1 No alias Endochitinase CH5B OS=Phaseolus vulgaris... 0.03 Archaeplastida
Mp4g20470.1 No alias Basic endochitinase B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Smo139127 No alias No description available 0.02 Archaeplastida
Smo14768 No alias Chitinase 2 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Solyc02g082930.3.1 No alias Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc10g074390.1.1 No alias Endochitinase A OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e000271_P001 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e007715_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.04 Archaeplastida
Zm00001e007716_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.03 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e030151_P001 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e034566_P001 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 27 60
No external refs found!