LOC_Os04g41820.1

Description : transcription factor (bZIP)

Gene families : OG0000167 (Archaeplastida) Phylogenetic Tree(s): OG0000167_tree ,
OG_05_0000303 (LandPlants) Phylogenetic Tree(s): OG_05_0000303_tree ,
OG_06_0017654 (SeedPlants) Phylogenetic Tree(s): OG_06_0017654_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g41820.1
Cluster	HCCA: Cluster_269

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00190730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	Archaeplastida
AMTR_s00185p00050380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	Archaeplastida
AMTR_s04408p00000200	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.03	Archaeplastida
AT1G58110	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	Archaeplastida
AT2G31370	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	Archaeplastida
Cre12.g501600	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.01	Archaeplastida
Cre17.g746547	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.01	Archaeplastida
GSVIVT01001783001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.02	Archaeplastida
GSVIVT01032683001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.07	Archaeplastida
Gb_07087	No alias	transcription factor (bZIP)	0.04	Archaeplastida
Gb_07823	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Gb_24798	No alias	transcription factor (bZIP)	0.05	Archaeplastida
MA_10435692g0020	No alias	transcription factor (bZIP)	0.02	Archaeplastida
MA_107919g0020	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_23986g0010	No alias	transcription factor (bZIP)	0.04	Archaeplastida
Pp3c19_15700V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	Archaeplastida
Pp3c19_15710V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	Archaeplastida
Pp3c22_13770V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	Archaeplastida
Pp3c24_10470V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	Archaeplastida
Pp3c2_26970V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	Archaeplastida
Pp3c6_7520V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	Archaeplastida
Pp3c8_11470V3.1	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	Archaeplastida
Solyc01g110480.4.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc04g071160.3.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc11g020950.3.1	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Zm00001e001587_P001	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Zm00001e003742_P001	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Zm00001e007706_P001	No alias	transcription factor (bZIP)	0.06	Archaeplastida
Zm00001e010978_P001	No alias	transcription factor (bZIP)	0.09	Archaeplastida
Zm00001e035856_P001	No alias	transcription factor (bZIP)	0.04	Archaeplastida
Zm00001e038237_P001	No alias	transcription factor (bZIP)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint	IEP	Neighborhood
BP	GO:0000077	DNA damage checkpoint	IEP	Neighborhood
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008276	protein methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0017056	structural constituent of nuclear pore	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
CC	GO:0030896	checkpoint clamp complex	IEP	Neighborhood
BP	GO:0031570	DNA integrity checkpoint	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044454	nuclear chromosome part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004827	bZIP	270	328

External Links

No external refs found!

LOC_Os04g41820.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation