AT1G29950

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0009784 (Archaeplastida) Phylogenetic Tree(s): OG0009784_tree ,
OG_05_0009854 (LandPlants) Phylogenetic Tree(s): OG_05_0009854_tree ,
OG_06_0008080 (SeedPlants) Phylogenetic Tree(s): OG_06_0008080_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G29950
Cluster	HCCA: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e030725_P001	No alias	transcription factor (bHLH)	0.08	Archaeplastida
Zm00001e037266_P001	No alias	transcription factor (bHLH)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Neighborhood
BP	GO:0001763	morphogenesis of a branching structure	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
MF	GO:0003977	UDP-N-acetylglucosamine diphosphorylase activity	IEP	Neighborhood
MF	GO:0003983	UTP:glucose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0004707	MAP kinase activity	IEP	Neighborhood
BP	GO:0006011	UDP-glucose metabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006047	UDP-N-acetylglucosamine metabolic process	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
MF	GO:0008413	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009086	methionine biosynthetic process	IEP	Neighborhood
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009823	cytokinin catabolic process	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010065	primary meristem tissue development	IEP	Neighborhood
BP	GO:0010067	procambium histogenesis	IEP	Neighborhood
BP	GO:0010073	meristem maintenance	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010223	secondary shoot formation	IEP	Neighborhood
BP	GO:0010346	shoot axis formation	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
MF	GO:0019177	dihydroneopterin triphosphate pyrophosphohydrolase activity	IEP	Neighborhood
BP	GO:0019276	UDP-N-acetylgalactosamine metabolic process	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
BP	GO:0043562	cellular response to nitrogen levels	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0048439	flower morphogenesis	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048508	embryonic meristem development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
MF	GO:0051748	UTP-monosaccharide-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0052630	UDP-N-acetylgalactosamine diphosphorylase activity	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G29950

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation