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  5. LOC_Os04g43440.1

LOC_Os04g43440.1


Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana (sp|q42484|rps2_arath : 314.0)


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g43440.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 Archaeplastida
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.04 Archaeplastida
AMTR_s00062p00106150 evm_27.TU.AmTr_v1... Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 Archaeplastida
AMTR_s00078p00177570 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.02 Archaeplastida
AMTR_s00078p00183610 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00101p00133980 evm_27.TU.AmTr_v1... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.03 Archaeplastida
AMTR_s00142p00041710 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.02 Archaeplastida
AT1G52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G63360 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
GSVIVT01015167001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01017264001 No alias No description available 0.04 Archaeplastida
GSVIVT01020293001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_08717 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_12853 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_12854 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_15875 No alias Putative disease resistance protein At4g10780... 0.02 Archaeplastida
LOC_Os01g72680.1 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10426937g0010 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
MA_104304g0010 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10436071g0020 No alias Probable disease resistance protein At4g27220... 0.04 Archaeplastida
MA_112657g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_122523g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.02 Archaeplastida
MA_129554g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.04 Archaeplastida
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_355252g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_378728g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_486866g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_502346g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5270774g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7058180g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_729125g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_781140g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_81901g0010 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
MA_8365843g0010 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.02 Archaeplastida
MA_9010869g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_91465g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9977400g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c3_38130V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Zm00001e007598_P002 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 504 562
IPR002182 NB-ARC 165 302
No external refs found!