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  5. LOC_Os04g44500.1

LOC_Os04g44500.1


Description : GEM-like protein 4 OS=Arabidopsis thaliana (sp|q9fta0|geml4_arath : 182.0)


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000920 (LandPlants) Phylogenetic Tree(s): OG_05_0000920_tree ,
OG_06_0000471 (SeedPlants) Phylogenetic Tree(s): OG_06_0000471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g44500.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g44510.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g29400.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_20704g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g008930.2.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g011580.2.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e015212_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e023068_P001 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e041280_P002 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 113 230
No external refs found!