1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g44820.1

LOC_Os04g44820.1


Description : RING-HC-class E3 ligase


Gene families : OG0000808 (Archaeplastida) Phylogenetic Tree(s): OG0000808_tree ,
OG_05_0000622 (LandPlants) Phylogenetic Tree(s): OG_05_0000622_tree ,
OG_06_0003086 (SeedPlants) Phylogenetic Tree(s): OG_06_0003086_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g44820.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00048p00164020 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc10g008400.1.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e002512_P002 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
Zm00001e003329_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e005157_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e019709_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041298_P002 No alias RING-HC-class E3 ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 39 89
No external refs found!