LOC_Os04g45570.1

Description : accessory component ATG13 of ATG1-13 autophagosome assembly control complex

Gene families : OG0002239 (Archaeplastida) Phylogenetic Tree(s): OG0002239_tree ,
OG_05_0001886 (LandPlants) Phylogenetic Tree(s): OG_05_0001886_tree ,
OG_06_0002158 (SeedPlants) Phylogenetic Tree(s): OG_06_0002158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g45570.1
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp7g03210.1	No alias	accessory component ATG13 of ATG1-13 autophagosome...	0.03	Archaeplastida
Pp3c2_10630V3.1	No alias	Autophagy-related protein 13	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006914	autophagy	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
CC	GO:1990316	Atg1/ULK1 kinase complex	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018731	Atg13	102	205

External Links

No external refs found!