LOC_Os04g46060.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g46060.1
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00243090	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00023p00208940	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00078p00171140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.03	Archaeplastida
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.04	Archaeplastida
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.03	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.04	Archaeplastida
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.03	Archaeplastida
GSVIVT01011356001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01022067001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_02351	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_25118	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os02g47060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g20550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os06g05380.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os09g15490.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_101135g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Pp3c13_15520V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c17_19970V3.1	No alias	WRKY DNA-binding protein 7	0.03	Archaeplastida
Pp3c3_15040V3.1	No alias	WRKY DNA-binding protein 57	0.02	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.02	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.04	Archaeplastida
Solyc01g058540.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc07g055280.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc09g066010.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g084380.1.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g011200.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc12g096350.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e002502_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.05	Archaeplastida
Zm00001e007834_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e010647_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e012066_P002	No alias	transcription factor (WRKY)	0.07	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	170	226

External Links

No external refs found!

LOC_Os04g46060.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation