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  5. LOC_Os04g47170.1

LOC_Os04g47170.1


Description : PRONE-type RopGEF guanine nucleotide exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0021667 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021010 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47170.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00182400 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.09 Archaeplastida
AMTR_s00009p00249740 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
AMTR_s00011p00264790 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.02 Archaeplastida
AMTR_s00109p00064220 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
AT1G01700 ATROPGEF2, ROPGEF2 RHO guanyl-nucleotide exchange factor 2 0.02 Archaeplastida
AT3G16130 PIRF2, ROPGEF13,... RHO guanyl-nucleotide exchange factor 13 0.03 Archaeplastida
AT5G02010 ROPGEF7, ATROPGEF7 RHO guanyl-nucleotide exchange factor 7 0.04 Archaeplastida
GSVIVT01015369001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
GSVIVT01017070001 No alias Multi-process regulation.Rop GTPase regulatory... 0.05 Archaeplastida
GSVIVT01034063001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
Gb_14425 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Gb_24552 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
LOC_Os05g38000.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
LOC_Os10g40270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
MA_2791g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
MA_66695g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Pp3c2_28420V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.02 Archaeplastida
Pp3c2_4460V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.02 Archaeplastida
Solyc01g094610.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc04g082110.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
Solyc09g011480.3.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e015569_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 94 455
No external refs found!