LOC_Os04g47990.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0012335 (SeedPlants) Phylogenetic Tree(s): OG_06_0012335_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47990.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00058p00210070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00160p00038440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00169p00055880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.03 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.1 Archaeplastida
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.05 Archaeplastida
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.05 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.03 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01003947001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.1 Archaeplastida
GSVIVT01007992001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_12877 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_28499 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_52474g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c14_24190V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.09 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc05g054510.2.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc11g066050.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc11g072500.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e003414_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023334_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e029641_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 76 132
No external refs found!