LOC_Os04g49570.2

Description : ligand-gated cation channel (GLR)

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000436 (LandPlants) Phylogenetic Tree(s): OG_05_0000436_tree ,
OG_06_0000332 (SeedPlants) Phylogenetic Tree(s): OG_06_0000332_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g49570.2
Cluster	HCCA: Cluster_324

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00182630	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AT1G05200	GLUR3, GLR3.4, ATGLR3.4	glutamate receptor 3.4	0.02	Archaeplastida
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.02	Archaeplastida
GSVIVT01033163001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
LOC_Os07g33790.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_10430853g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_212254g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_6222576g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc07g052400.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Zm00001e013025_P003	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
BP	GO:0006066	alcohol metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
BP	GO:0019751	polyol metabolic process	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0043647	inositol phosphate metabolic process	IEP	Neighborhood
BP	GO:0044282	small molecule catabolic process	IEP	Neighborhood
BP	GO:0046164	alcohol catabolic process	IEP	Neighborhood
BP	GO:0046174	polyol catabolic process	IEP	Neighborhood
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Neighborhood
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Neighborhood
BP	GO:0071545	inositol phosphate catabolic process	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Neighborhood
CC	GO:1990204	oxidoreductase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	48	408
IPR001638	Solute-binding_3/MltF_N	478	809
IPR001320	Iontro_rcpt	810	845

External Links

No external refs found!