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  5. LOC_Os04g50030.1

LOC_Os04g50030.1


Description : AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana (sp|o23620|ahl23_arath : 192.0)


Gene families : OG0000411 (Archaeplastida) Phylogenetic Tree(s): OG0000411_tree ,
OG_05_0000205 (LandPlants) Phylogenetic Tree(s): OG_05_0000205_tree ,
OG_06_0000150 (SeedPlants) Phylogenetic Tree(s): OG_06_0000150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g50030.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00189120 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.06 Archaeplastida
AMTR_s00012p00257450 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.05 Archaeplastida
AMTR_s00135p00017880 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 17... 0.02 Archaeplastida
AT2G35270 GIK Predicted AT-hook DNA-binding family protein 0.03 Archaeplastida
AT2G45430 AHL22 AT-hook motif nuclear-localized protein 22 0.04 Archaeplastida
AT3G04570 AHL19 AT-hook motif nuclear-localized protein 19 0.02 Archaeplastida
AT3G55560 AHL15, AGF2 AT-hook protein of GA feedback 2 0.03 Archaeplastida
AT3G60870 AHL18 AT-hook motif nuclear-localized protein 18 0.03 Archaeplastida
AT4G12050 No alias Predicted AT-hook DNA-binding family protein 0.06 Archaeplastida
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.03 Archaeplastida
AT4G17800 No alias Predicted AT-hook DNA-binding family protein 0.04 Archaeplastida
AT4G22810 No alias Predicted AT-hook DNA-binding family protein 0.03 Archaeplastida
GSVIVT01013202001 No alias AT-hook motif nuclear-localized protein 23... 0.02 Archaeplastida
GSVIVT01016497001 No alias AT-hook motif nuclear-localized protein 15... 0.05 Archaeplastida
GSVIVT01019932001 No alias AT-hook motif nuclear-localized protein 24... 0.04 Archaeplastida
GSVIVT01036210001 No alias AT-hook motif nuclear-localized protein 19... 0.03 Archaeplastida
Gb_15730 No alias AT-hook motif nuclear-localized protein 16... 0.06 Archaeplastida
Gb_33065 No alias AT-hook motif nuclear-localized protein 20... 0.04 Archaeplastida
Gb_34320 No alias AT-hook motif nuclear-localized protein 24... 0.02 Archaeplastida
MA_2055g0010 No alias AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida
MA_284g0020 No alias AT-hook motif nuclear-localized protein 23... 0.04 Archaeplastida
MA_291092g0010 No alias AT-hook motif nuclear-localized protein 20... 0.05 Archaeplastida
MA_41289g0010 No alias AT-hook motif nuclear-localized protein 17... 0.03 Archaeplastida
MA_5409554g0010 No alias No annotation 0.04 Archaeplastida
MA_90407g0010 No alias AT-hook motif nuclear-localized protein 22... 0.02 Archaeplastida
Pp3c10_8330V3.1 No alias Predicted AT-hook DNA-binding family protein 0.04 Archaeplastida
Pp3c2_3980V3.1 No alias Predicted AT-hook DNA-binding family protein 0.03 Archaeplastida
Smo404546 No alias AT-hook motif nuclear-localized protein 20... 0.04 Archaeplastida
Smo57074 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Solyc01g091470.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.06 Archaeplastida
Solyc06g060500.1.1 No alias AT-hook motif nuclear-localized protein 22... 0.02 Archaeplastida
Solyc07g056300.1.1 No alias AT-hook motif nuclear-localized protein 16... 0.03 Archaeplastida
Solyc08g077010.1.1 No alias AT-hook motif nuclear-localized protein 23... 0.05 Archaeplastida
Solyc08g079720.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.05 Archaeplastida
Solyc11g006090.3.1 No alias AT-hook motif nuclear-localized protein 19... 0.04 Archaeplastida
Solyc12g087950.1.1 No alias AT-hook motif nuclear-localized protein 17... 0.03 Archaeplastida
Zm00001e003878_P001 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Zm00001e007105_P001 No alias AT-hook motif nuclear-localized protein 23... 0.09 Archaeplastida
Zm00001e014298_P001 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Zm00001e016254_P001 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Zm00001e021704_P001 No alias AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida
Zm00001e022037_P001 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Zm00001e024863_P001 No alias AT-hook motif nuclear-localized protein 23... 0.09 Archaeplastida
Zm00001e036953_P001 No alias AT-hook motif nuclear-localized protein 21... 0.02 Archaeplastida
Zm00001e040207_P002 No alias AT-hook motif nuclear-localized protein 21... 0.03 Archaeplastida
Zm00001e041402_P001 No alias AT-hook motif nuclear-localized protein 21... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 110 223
No external refs found!