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  5. LOC_Os04g51280.1

LOC_Os04g51280.1


Description : RNA editing factor (MORF)


Gene families : OG0005406 (Archaeplastida) Phylogenetic Tree(s): OG0005406_tree ,
OG_05_0003669 (LandPlants) Phylogenetic Tree(s): OG_05_0003669_tree ,
OG_06_0002290 (SeedPlants) Phylogenetic Tree(s): OG_06_0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g51280.1
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027872001 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
Gb_32072 No alias RNA editing factor (MORF) 0.02 Archaeplastida
Solyc05g054960.4.1 No alias RNA editing factor (MORF) 0.04 Archaeplastida
Solyc06g008220.4.1 No alias RNA editing factor (MORF) 0.07 Archaeplastida
Zm00001e029854_P001 No alias RNA editing factor (MORF) 0.03 Archaeplastida
Zm00001e041577_P001 No alias RNA editing factor (MORF) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!