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  5. LOC_Os04g54810.1

LOC_Os04g54810.1


Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0001017 (SeedPlants) Phylogenetic Tree(s): OG_06_0001017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54810.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 Archaeplastida
AMTR_s00045p00064060 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
AMTR_s00057p00049120 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AMTR_s00068p00088730 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AMTR_s00125p00113140 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AT1G78060 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida
GSVIVT01006776001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01009003001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01017656001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01017658001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01017660001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.01 Archaeplastida
GSVIVT01028104001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
LOC_Os02g51620.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
MA_102349g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
MA_10436568g0020 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.06 Archaeplastida
Mp2g08000.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.01 Archaeplastida
Pp3c24_9140V3.1 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida
Smo112087 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
Solyc01g079570.3.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida
Solyc01g104950.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g072850.4.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.09 Archaeplastida
Solyc04g072860.3.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
Zm00001e008876_P002 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Zm00001e015868_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.1 Archaeplastida
Zm00001e041753_P002 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 112 353
IPR026891 Fn3-like 690 756
IPR002772 Glyco_hydro_3_C 399 629
No external refs found!