LOC_Os04g56090.1

Description : protein kinase (SD-2)

Gene families : OG0000592 (Archaeplastida) Phylogenetic Tree(s): OG0000592_tree ,
OG_05_0000343 (LandPlants) Phylogenetic Tree(s): OG_05_0000343_tree ,
OG_06_0000405 (SeedPlants) Phylogenetic Tree(s): OG_06_0000405_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g56090.1
Cluster	HCCA: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00228760	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.03	Archaeplastida
AMTR_s00005p00228790	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
GSVIVT01009410001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	Archaeplastida
GSVIVT01009412001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	Archaeplastida
GSVIVT01009414001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	Archaeplastida
GSVIVT01009417001	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.03	Archaeplastida
GSVIVT01009421001	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.04	Archaeplastida
GSVIVT01009422001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.05	Archaeplastida
GSVIVT01034078001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.04	Archaeplastida
Gb_37078	No alias	protein kinase (SD-2)	0.04	Archaeplastida
LOC_Os01g47820.1	No alias	protein kinase (SD-2)	0.04	Archaeplastida
LOC_Os01g47900.1	No alias	protein kinase (SD-2)	0.04	Archaeplastida
LOC_Os01g48020.1	No alias	protein kinase (SD-2)	0.04	Archaeplastida
LOC_Os04g56080.1	No alias	protein kinase (SD-2)	0.06	Archaeplastida
LOC_Os06g06940.1	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.01	Archaeplastida
LOC_Os06g06960.1	No alias	protein kinase (SD-2)	0.03	Archaeplastida
LOC_Os06g37750.1	No alias	protein kinase (SD-2)	0.07	Archaeplastida
LOC_Os11g03840.1	No alias	protein kinase (SD-2)	0.02	Archaeplastida
LOC_Os11g03880.1	No alias	protein kinase (SD-2)	0.02	Archaeplastida
LOC_Os12g03640.1	No alias	protein kinase (SD-2)	0.04	Archaeplastida
LOC_Os12g03650.1	No alias	protein kinase (SD-2)	0.03	Archaeplastida
MA_10428853g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10429053g0020	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	Archaeplastida
MA_10436159g0020	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	Archaeplastida
MA_121826g0010	No alias	protein kinase (SD-2)	0.02	Archaeplastida
MA_331881g0010	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.02	Archaeplastida
MA_503135g0010	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.03	Archaeplastida
Solyc04g078410.4.1	No alias	protein kinase (SD-2)	0.03	Archaeplastida
Solyc09g011330.3.1	No alias	protein kinase (SD-2)	0.03	Archaeplastida
Zm00001e028026_P001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008037	cell recognition	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0048544	recognition of pollen	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004834	tryptophan synthase activity	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006568	tryptophan metabolic process	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006586	indolalkylamine metabolic process	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0042430	indole-containing compound metabolic process	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000858	S_locus_glycoprot_dom	250	318
IPR001480	Bulb-type_lectin_dom	79	165
IPR003609	Pan_app	342	391
IPR000719	Prot_kinase_dom	524	805

External Links

No external refs found!

LOC_Os04g56090.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation