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  5. LOC_Os04g56150.1

LOC_Os04g56150.1


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001872 (SeedPlants) Phylogenetic Tree(s): OG_06_0001872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56150.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G14230 RAP2.2 related to AP2 2 0.03 Archaeplastida
Gb_03368 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.01 Archaeplastida
LOC_Os02g45420.1 No alias transcription factor (DREB) 0.01 Archaeplastida
LOC_Os03g22170.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.01 Archaeplastida
LOC_Os06g09717.1 No alias Ethylene-responsive transcription factor ERF018... 0.06 Archaeplastida
LOC_Os09g13940.2 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.01 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.01 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.01 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc06g063070.3.1 No alias transcription factor (ERF) 0.01 Archaeplastida
Solyc08g078410.2.1 No alias transcription factor (DREB) 0.17 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.01 Archaeplastida
Zm00001e003858_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e023870_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e033072_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.01 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 2 50
No external refs found!