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  5. LOC_Os05g04820.1

LOC_Os05g04820.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g04820.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00019p00201260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00137930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00038p00150140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00061p00110540 evm_27.TU.AmTr_v1... Transcription factor MYB80 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00091p00025820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00119p00105590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.02 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.08 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.1 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.05 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.1 Archaeplastida
AT2G16720 MYB7, ATY49, ATMYB7 myb domain protein 7 0.04 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.02 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.04 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.03 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.03 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.06 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.02 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.05 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.09 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.09 Archaeplastida
AT4G37780 ATMYB87, MYB87 myb domain protein 87 0.02 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.04 Archaeplastida
AT5G16600 MYB43, AtMYB43 myb domain protein 43 0.05 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.04 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007670001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008401001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008402001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.1 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033418001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_23598 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_24641 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40065 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40629 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2026g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_214345g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_298677g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_355131g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8846750g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g112390.3.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g079270.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g065840.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.15 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026166_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038964_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.13 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.14 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!