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  5. LOC_Os05g05150.1

LOC_Os05g05150.1


Description : component SLD5 of GINS DNA replication fork maintenance complex


Gene families : OG0005036 (Archaeplastida) Phylogenetic Tree(s): OG0005036_tree ,
OG_05_0005999 (LandPlants) Phylogenetic Tree(s): OG_05_0005999_tree ,
OG_06_0007917 (SeedPlants) Phylogenetic Tree(s): OG_06_0007917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g05150.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
MA_9017322g0020 No alias component SLD5 of GINS DNA replication fork maintenance complex 0.02 Archaeplastida
Pp3c12_20580V3.1 No alias DNA replication protein-related 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021151 GINS_A 55 121
IPR031633 SLD5_C 166 220
No external refs found!