1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g07120.1

LOC_Os05g07120.1


Description : transcription factor (bHLH)


Gene families : OG0000757 (Archaeplastida) Phylogenetic Tree(s): OG0000757_tree ,
OG_05_0000493 (LandPlants) Phylogenetic Tree(s): OG_05_0000493_tree ,
OG_06_0000486 (SeedPlants) Phylogenetic Tree(s): OG_06_0000486_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07120.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.04 Archaeplastida
LOC_Os08g37290.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g076920.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e001119_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e006132_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e016455_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e016835_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e022445_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034395_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e038535_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 70 115
No external refs found!