1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g07270.1

LOC_Os05g07270.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0002612 (SeedPlants) Phylogenetic Tree(s): OG_06_0002612_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07270.1
Cluster HCCA: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AMTR_s00007p00227160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00080p00153120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.03 Archaeplastida
AT1G31320 LBD4 LOB domain-containing protein 4 0.05 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.09 Archaeplastida
AT5G63090 LOB Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
GSVIVT01003546001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01004323001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01016330001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01024592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032752001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_10524 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_19388 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_22180 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_29853 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_10430986g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
MA_9412105g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Mp1g14500.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Pp3c20_10200V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
Pp3c22_5950V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
Pp3c23_14630V3.1 No alias LOB domain-containing protein 13 0.04 Archaeplastida
Solyc01g109240.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g112430.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc05g048740.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050430.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g071660.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.11 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.1 Archaeplastida
Zm00001e005215_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e019424_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.22 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.22 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 27 124
No external refs found!