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  5. LOC_Os05g08530.1

LOC_Os05g08530.1


Description : Root phototropism protein 3 OS=Arabidopsis thaliana (sp|q9fmf5|rpt3_arath : 99.4)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0007350 (LandPlants) Phylogenetic Tree(s): OG_05_0007350_tree ,
OG_06_0004637 (SeedPlants) Phylogenetic Tree(s): OG_06_0004637_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g08530.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00262560 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48800... 0.04 Archaeplastida
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.04 Archaeplastida
AMTR_s00059p00182270 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
AMTR_s00065p00211770 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.05 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida
GSVIVT01027413001 No alias BTB/POZ domain-containing protein At5g17580... 0.03 Archaeplastida
GSVIVT01029878001 No alias BTB/POZ domain-containing protein At3g08570... 0.03 Archaeplastida
GSVIVT01030043001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
GSVIVT01037852001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida
Gb_16497 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Gb_41063 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g08130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g35970.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.05 Archaeplastida
LOC_Os07g36230.1 No alias BTB/POZ domain-containing protein At3g22104... 0.05 Archaeplastida
LOC_Os12g02540.1 No alias BTB/POZ domain-containing protein At3g08570... 0.04 Archaeplastida
LOC_Os12g41910.2 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
MA_10428359g0010 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.05 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
MA_42230g0010 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.05 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
MA_90165g0010 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Mp5g07060.1 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Pp3c13_16380V3.1 No alias Phototropic-responsive NPH3 family protein 0.01 Archaeplastida
Pp3c21_3700V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c3_20030V3.1 No alias Phototropic-responsive NPH3 family protein 0.07 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Pp3c6_12160V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c7_2140V3.1 No alias Phototropic-responsive NPH3 family protein 0.01 Archaeplastida
Pp3c7_4380V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c9_23280V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Solyc01g098820.3.1 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Solyc02g064720.3.1 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g048000.3.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Solyc09g061250.4.1 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Solyc10g047530.2.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Solyc10g086137.2.1 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida
Zm00001e003063_P004 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011959_P001 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
Zm00001e014883_P001 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Zm00001e016726_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e019629_P002 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida
Zm00001e022869_P001 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 91 325
No external refs found!