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  5. LOC_Os05g08770.2

LOC_Os05g08770.2


Description : LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g08770.2
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.03 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.06 Archaeplastida
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.09 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01034267001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_08992 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_10910 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.05 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.05 Archaeplastida
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Pp3c8_3600V3.1 No alias leucine-rich repeat/extensin 1 0.02 Archaeplastida
Smo134330 No alias Leucine-rich repeat extensin-like protein 4... 0.02 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.04 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e007641_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e030216_P001 No alias LRR-domain extensin 0.05 Archaeplastida
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.04 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.06 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 124 182
No external refs found!