1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g09640.1

LOC_Os05g09640.1


Description : Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana (sp|q9lhf1|lrx4_arath : 251.0)


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g09640.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.06 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.08 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.05 Archaeplastida
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 Archaeplastida
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.14 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_08992 No alias LRR-domain extensin 0.02 Archaeplastida
Gb_12380 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_29819 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os01g08470.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.06 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.03 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.08 Archaeplastida
MA_5516756g0010 No alias LRR-domain extensin 0.03 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
Pp3c8_3600V3.1 No alias leucine-rich repeat/extensin 1 0.02 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.04 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.03 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e007641_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e030216_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.04 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.06 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 111 169
IPR001611 Leu-rich_rpt 256 274
IPR013210 LRR_N_plant-typ 38 75
No external refs found!