LOC_Os05g10730.1


Description : subfamily ABCC transporter


Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000363 (LandPlants) Phylogenetic Tree(s): OG_05_0000363_tree ,
OG_06_0003613 (SeedPlants) Phylogenetic Tree(s): OG_06_0003613_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g10730.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00219490 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cpa|evm.model.tig00000718.1 No alias ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00000718.2 No alias ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00000718.3 No alias ABC transporter C family member 6 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020553.190 No alias ABC transporter C family member 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cpa|evm.model.tig00020592.4 No alias ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre07.g325761 No alias ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre13.g564900 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Cre17.g734612 No alias ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01018403001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_14725 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_10436190g0020 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 Archaeplastida
MA_629244g0010 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp4g11930.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Pp3c13_19960V3.1 No alias multidrug resistance-associated protein 5 0.02 Archaeplastida
Smo145432 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo147933 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Zm00001e026288_P002 No alias subfamily ABCC transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1262 1410
IPR011527 ABC1_TM_dom 935 1194
IPR011527 ABC1_TM_dom 352 583
IPR003439 ABC_transporter-like 649 783
No external refs found!