1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g10920.1

LOC_Os05g10920.1


Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 88.2)


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0011640 (SeedPlants) Phylogenetic Tree(s): OG_06_0011640_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g10920.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os04g55370.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g33350.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g30520.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 14 272
No external refs found!