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  5. LOC_Os05g12030.1

LOC_Os05g12030.1


Description : no hits & (original description: none)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000480 (LandPlants) Phylogenetic Tree(s): OG_05_0000480_tree ,
OG_06_0006233 (SeedPlants) Phylogenetic Tree(s): OG_06_0006233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g12030.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00049p00216130 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
AMTR_s00077p00161250 evm_27.TU.AmTr_v1... Root phototropism protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT3G50840 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G66560 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
GSVIVT01024541001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_34273 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Gb_41063 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os09g09370.2 No alias BTB/POZ domain-containing protein At5g47800... 0.05 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c11_23370V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c12_21590V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c21_3700V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Solyc02g092560.3.1 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc07g048000.3.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Zm00001e006815_P001 No alias BTB/POZ domain-containing protein At5g03250... 0.02 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e035388_P001 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
Zm00001e039271_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!