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LOC_Os05g13580.1


Description : Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica (sp|q0djv6|cml18_orysj : 243.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0000352 (SeedPlants) Phylogenetic Tree(s): OG_06_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g13580.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT2G41090 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.02 Archaeplastida
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.07 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_130379g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
MA_18054g0030 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g10070.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g005370.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g072240.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 89 151
IPR002048 EF_hand_dom 5 65
No external refs found!