LOC_Os05g15180.1


Description : no hits & (original description: none)


Gene families : OG0008794 (Archaeplastida) Phylogenetic Tree(s): OG0008794_tree ,
OG_05_0008787 (LandPlants) Phylogenetic Tree(s): OG_05_0008787_tree ,
OG_06_0009924 (SeedPlants) Phylogenetic Tree(s): OG_06_0009924_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g15180.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01036913001 No alias No description available 0.05 Archaeplastida
Zm00001e031316_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!