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  5. LOC_Os05g23280.1

LOC_Os05g23280.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23280.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g06200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g15190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g29370.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g35080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g35470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g39360.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g41500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g25440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g27630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g33260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g03220.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g03240.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g29660.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g31640.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g36470.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g01190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g05680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g10190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g14870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g19910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g21380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g24080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g24390.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g04430.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g17040.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g17970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18910.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g20820.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g24950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g28560.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g31430.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g22790.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g23080.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g29750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35380.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g45530.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g47370.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g48460.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g07830.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g13690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g14970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g18200.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g20690.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g26800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g27690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g44520.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g07230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g13500.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g13560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g19460.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g27300.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g33250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g07250.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g07690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g14740.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g22350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g11930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g26930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g10830.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g15100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g22020.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g22690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g23090.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g24920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g28560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g29450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g33060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g35690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g05500.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g14270.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g16820.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g16960.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g20350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g23640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g28340.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!