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  5. LOC_Os05g24780.1

LOC_Os05g24780.1


Description : Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica (sp|q0dj94|cml21_orysj : 153.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001715 (SeedPlants) Phylogenetic Tree(s): OG_06_0001715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g24780.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269730 evm_27.TU.AmTr_v1... Calmodulin-like protein 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00025p00186360 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00095p00113890 evm_27.TU.AmTr_v1... Calmodulin OS=Medicago sativa 0.02 Archaeplastida
AT2G41090 No alias Calcium-binding EF-hand family protein 0.05 Archaeplastida
AT2G41410 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT3G51920 ATCML9, CAM9, CML9 calmodulin 9 0.03 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.03 Archaeplastida
AT4G37010 CEN2 centrin 2 0.04 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01021797001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.03 Archaeplastida
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_15095 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_23652 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g59530.1 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.05 Archaeplastida
MA_10289213g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10431273g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10432950g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_1190858g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_130379g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_13199g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
MA_18054g0030 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida
MA_393053g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_472945g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7799814g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g22210.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c14_8590V3.1 No alias calmodulin 5 0.01 Archaeplastida
Pp3c16_23390V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.01 Archaeplastida
Smo91501 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Smo96597 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g005370.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.06 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.02 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e009213_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.05 Archaeplastida
Zm00001e018064_P001 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.04 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 41 67
IPR002048 EF_hand_dom 129 193
No external refs found!