LOC_Os05g25260.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g25260.1
Cluster	HCCA: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AT1G12630	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G33710	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G40220	ABI4, SAN5,...	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.03	Archaeplastida
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.04	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10431706g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_113446g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_18403g0020	No alias	Ethylene-responsive transcription factor RAP2-4...	0.03	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_425410g0010	No alias	Ethylene-responsive transcription factor RAP2-13...	0.03	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c1_27630V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo92334	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
Solyc01g057080.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc02g093130.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g093540.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.05	Archaeplastida
Solyc03g120840.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e007332_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e019566_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.02	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e028920_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e033965_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e038888_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
BP	GO:0007050	cell cycle arrest	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	97	146

External Links

No external refs found!

LOC_Os05g25260.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation