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  5. LOC_Os05g25490.1

LOC_Os05g25490.1


Description : Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur lyase(50.4.4 : 609.3) & 1-aminocyclopropane-1-carboxylate synthase 7 OS=Arabidopsis thaliana (sp|q9str4|1a17_arath : 545.0)


Gene families : OG0000541 (Archaeplastida) Phylogenetic Tree(s): OG0000541_tree ,
OG_05_0000356 (LandPlants) Phylogenetic Tree(s): OG_05_0000356_tree ,
OG_06_0000417 (SeedPlants) Phylogenetic Tree(s): OG_06_0000417_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g25490.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G01480 AT-ACC2, ACS2 1-amino-cyclopropane-1-carboxylate synthase 2 0.04 Archaeplastida
AT2G22810 ACS4, ACC4, ATACS4 1-aminocyclopropane-1-carboxylate synthase 4 0.02 Archaeplastida
AT3G49700 AtACS9, ETO3, ACS9 1-aminocyclopropane-1-carboxylate synthase 9 0.03 Archaeplastida
AT4G08040 ACS11 1-aminocyclopropane-1-carboxylate synthase 11 0.03 Archaeplastida
AT4G11280 ACS6, ATACS6 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.03 Archaeplastida
AT4G26200 ATACS7, ACS7 1-amino-cyclopropane-1-carboxylate synthase 7 0.02 Archaeplastida
AT4G37770 ACS8 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Archaeplastida
GSVIVT01004571001 No alias Phytohormones.ethylene.synthesis.1-aminocyclopropane-1-ca... 0.01 Archaeplastida
GSVIVT01004794001 No alias Phytohormones.ethylene.synthesis.1-aminocyclopropane-1-ca... 0.02 Archaeplastida
GSVIVT01026962001 No alias Phytohormones.ethylene.synthesis.1-aminocyclopropane-1-ca... 0.03 Archaeplastida
LOC_Os03g51740.1 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.03 Archaeplastida
MA_103524g0010 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.03 Archaeplastida
MA_10375359g0010 No alias Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur... 0.02 Archaeplastida
MA_10425896g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10425896g0020 No alias Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur... 0.03 Archaeplastida
MA_14219g0010 No alias Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur... 0.03 Archaeplastida
MA_162831g0010 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.02 Archaeplastida
MA_36337g0010 No alias Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur... 0.02 Archaeplastida
Solyc03g043890.3.1 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.03 Archaeplastida
Solyc05g050010.3.1 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.02 Archaeplastida
Solyc12g056180.3.1 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.04 Archaeplastida
Zm00001e005548_P001 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.03 Archaeplastida
Zm00001e016575_P001 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.02 Archaeplastida
Zm00001e041412_P001 No alias 1-aminocyclopropane-1-carboxylate (ACC) synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 56 457
No external refs found!