LOC_Os05g34730.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001540 (SeedPlants) Phylogenetic Tree(s): OG_06_0001540_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g34730.1
Cluster	HCCA: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00095120	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF110...	0.01	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00019p00232450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00026p00180130	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF084...	0.01	Archaeplastida
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00095p00096190	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.01	Archaeplastida
AMTR_s00099p00039760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.01	Archaeplastida
AT2G35700	ERF38, ATERF38	ERF family protein 38	0.01	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.02	Archaeplastida
AT3G50260	DEAR1, CEJ1, ATERF#011	cooperatively regulated by ethylene and jasmonate 1	0.02	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.02	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G25190	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.01	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.01	Archaeplastida
GSVIVT01021098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.05	Archaeplastida
GSVIVT01035502001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01212	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.01	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.01	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.01	Archaeplastida
Gb_32532	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os02g32040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.02	Archaeplastida
LOC_Os08g44960.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
MA_10433094g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.01	Archaeplastida
MA_214532g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.01	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.14	Archaeplastida
MA_463250g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5306433g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_81979g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.02	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g17020.1	No alias	Dehydration-responsive element-binding protein 2C...	0.01	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.01	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Smo409196	No alias	External stimuli response.biotic...	0.01	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
Solyc03g005520.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc08g078180.1.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.01	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.01	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.01	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e035334_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	18	61

External Links

No external refs found!

LOC_Os05g34730.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation