1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g35460.1

LOC_Os05g35460.1


Description : Patellin-5 OS=Arabidopsis thaliana (sp|q9m0r2|patl5_arath : 385.0)


Gene families : OG0000809 (Archaeplastida) Phylogenetic Tree(s): OG0000809_tree ,
OG_05_0000939 (LandPlants) Phylogenetic Tree(s): OG_05_0000939_tree ,
OG_06_0001148 (SeedPlants) Phylogenetic Tree(s): OG_06_0001148_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35460.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00086020 evm_27.TU.AmTr_v1... Patellin-6 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00032p00036450 evm_27.TU.AmTr_v1... Patellin-4 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G22530 PATL2 PATELLIN 2 0.04 Archaeplastida
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.1 Archaeplastida
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_20479 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_149438g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g16700.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g16720.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g064940.3.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e019109_P003 No alias Patellin-5 OS=Arabidopsis thaliana... 0.14 Archaeplastida
Zm00001e031729_P005 No alias Patellin-5 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 239 278
IPR001251 CRAL-TRIO_dom 305 464
No external refs found!